Genomic Maps for microRNA [NCTU]
MicroRNAs (miRNAs) are small noncoding RNA molecules, which are capable of negatively regulating gene expression to control many cellular mechanisms. In this work, we develop a resource, miRNAMap 2.0, to collect experimental verified microRNAs and experimental verified miRNA target genes in human, mouse, rat, and other metazoan genomes.

Tumor Associated Gene [NCKU]
The tumor-associated gene (TAG) database was designed to utilize information from well-characterized oncogenes and tumor suppressor genes to facilitate cancer research. All target genes were identified through text-mining approach from the PubMed database.

Comparative Analysis of Protein Interactions for HIV-1 [NHRI]
CAPIH aims to provide HIV and AIDS researchers a comparative view of host-HIV-1 protein interactions between human and three major animal models: chimpanzee, rhesus macaque, and mouse. The interface demonstrates that a considerable number of differences exist between human and the model organisms, including amino acid substitutions, insertions/deletions, and post-translational modifications (PTMs).

Protein Post-Translational Modification Database [NCTU]
dbPTM was proposed to integrate experimentally verified PTMs from several databases, and to annotate the predicted PTMs on Swiss-Prot proteins. This update extends dbPTM to a knowledgebase comprisingthe modified sites, solvent accessibility of substrate, protein secondary and tertiary structures, protein domains and protein variations.

Drosophila Database of Protein Interactomes [NHRI]
Fly-DPI is the online database and an integrated proteomics tool with comprehensive protein annotation information from major databases as well as an effective means of predicting protein-protein interactions.